Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs7920390 | chr10:63474576 | A/G | 0 | 213 | 18.03 | 6.2 | 3.38 | KM Plot |
| KIRP | rs79225202 | chr11:34797803 | A/C | 0 | 214 | 15.2 | 17.73 | 3.83 | KM Plot |
| KIRP | rs79313350 | chr17:80797605 | G/T | 9.88E-5 | 211 | 16.43 | 15.07 | 15.15 | KM Plot |
| KIRP | rs7931454 | chr11:34926957 | T/C | 4.21E-12 | 213 | 17.08 | 13.17 | 5.57 | KM Plot |
| KIRP | rs79376832 | chr11:34946115 | G/A | 4.21E-12 | 214 | 17.08 | 12.6 | 5.57 | KM Plot |
| KIRP | rs7938962 | chr11:34964636 | T/C | 4.8E-12 | 213 | 17.08 | 12.02 | 5.57 | KM Plot |
| KIRP | rs7941930 | chr11:34947864 | C/T | 4.21E-12 | 214 | 5.57 | 12.6 | 17.08 | KM Plot |
| KIRP | rs79426580 | chr11:34801591 | A/G | 0 | 214 | 15.88 | 16.72 | 3.83 | KM Plot |
| KIRP | rs79438656 | chr11:34999080 | G/C | 0 | 212 | 15.33 | 19.3 | 3.83 | KM Plot |
| KIRP | rs79483299 | chr2:74586737 | T/TA | 1.84E-8 | 213 | 16.43 | 16.53 | 7.18 | KM Plot |
| KIRP | rs79499199 | chr17:80827157 | A/T | 0.000101 | 210 | 15.1 | 18 | 13.17 | KM Plot |
| KIRP | rs79499880 | chr3:50259551 | A/G | 0.000144 | 210 | 15.75 | 19.5 | 7.13 | KM Plot |
| KIRP | rs79519930 | chr3:100010639 | T/G | 3.84E-5 | 204 | 16.43 | 18.88 | 6.03 | KM Plot |
| KIRP | rs79526436 | chr10:63437952 | C/T | 0 | 211 | 18.02 | 6.2 | 6.7 | KM Plot |
| KIRP | rs79648256 | chr10:63475071 | T/C | 0 | 213 | 18.03 | 6.2 | 3.38 | KM Plot |